OutSplice: A Novel Tool for the Identification of Tumor-Specific Alternative Splicing Events
Bendik, J.; Kalavacherla, S.; Webster, N.; Califano, J.; Fertig, E.J.; Ochs, M.F.; Carter, H.; Guo, T.W. BioMedInformatics 2023, 3, 853-868, doi:https://doi.org/10.3390/biomedinformatics3040053

Outcomes of patients with oropharyngeal squamous cell carcinoma treated with induction chemotherapy followed by concurrent chemoradiation compared with those treated with concurrent chemoradiation
Guo, T.W.; Saiyed, F.; Yao, C.M.K.L.; Kiong, K.L.; Martinez, J.; Sacks, R.; Lee, J.J.; Moreno, A.C.; Frank, S.J.; Rosenthal, D.I.; et al.Cancer-Am Cancer Soc 2021, 127, 2916-2925, doi:10.1002/cncr.33491

Chromatin structure regulates cancer-specific alternative splicing events in primary HPV-related oropharyngeal squamous cell carcinoma
Guo, T.; Zambo, K.D.A.; Zamuner, F.T.; Ou, T.; Hopkins, C.; Kelley, D.Z.; Wulf, H.A.; Winkler, E.; Erbe, R.; Danilova, L.; et al.
Epigenetics 2020, 15, 959-971, doi:10.1080/15592294.2020.1741757

A novel splice variant of LOXL2 promotes progression of human papillomavirus-negative head and neck squamous cell carcinoma
Liu, C.; Guo, T.; Sakai, A.; Ren, S.; Fukusumi, T.; Ando, M.; Sadat, S.; Saito, Y.; Califano, J.A.
Cancer 2020, 126, 737-748, doi:10.1002/cncr.32610.

Characterization of Alternative Splicing Events in HPV-Negative Head and Neck Squamous Cell Carcinoma Identifies an Oncogenic DOCK5 Variant
Liu, C.; Guo, T.; Xu, G.; Sakai, A.; Ren, S.; Fukusumi, T.; Ando, M.; Sadat, S.; Saito, Y.; Khan, Z.; et al.
Clin Cancer Res 2018, 24, 5123-5132, doi:10.1158/1078-0432.CCR-18-0752

Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer
Afsari, B.; Guo, T.; Considine, M.; Florea, L.; Kagohara, L.T.; Stein-O'Brien, G.L.; Kelley, D.; Flam, E.; Zambo, K.D.; Ha, P.K.; et al.
Bioinformatics 2018, 34, 1859-1867, doi:10.1093/bioinformatics/bty004

A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers 
Guo, T.; Sakai, A.; Afsari, B.; Considine, M.; Danilova, L.; Favorov, A.V.; Yegnasubramanian, S.; Kelley, D.Z.; Flam, E.; Ha, P.K.; et al.
Cancer Res 2017, 77, 5248-5258, doi:10.1158/0008-5472.CAN-16-3106

Characterization of functionally active gene fusions in human papillomavirus related oropharyngeal squamous cell carcinoma
Guo, T.; Gaykalova, D.A.; Considine, M.; Wheelan, S.; Pallavajjala, A.; Bishop, J.A.; Westra, W.H.; Ideker, T.; Koch, W.M.; Khan, Z.; et al. 
Int J Cancer 2016, 139, 373-382, doi:10.1002/ijc.30081